mixcr exportTables
Export postanalysis results in a tabular form.
mixcr exportTables
[--chains <chain>]...
[-nw] [--verbose] [-h]
pa.json[.gz] table.(tsv|csv)
Allows to export in tab-delimited (.tsv
) or coma-separated (.csv
) formats. Option --chains
may be used to export results only for a specified chains.
The output name is actually a pattern that is used to export different metrics into separate files. For example exporting overlap metrics with the following command:
> mixcr exportTables pa/o.json.gz pa/o.tsv
will produce the following files in the output:
> ls pa/*
o.F1Index.TRAD.tsv
o.F1Index.TRB.tsv
o.F1Index.TRG.tsv
o.F2Index.TRAD.tsv
o.F2Index.TRB.tsv
o.F2Index.TRG.tsv
...