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mixcr exportTables

Export postanalysis results in a tabular form.

mixcr exportTables 
    [--chains <chain>]... 
    [-nw] [--verbose] [-h] 
    pa.json[.gz] table.(tsv|csv)

Allows to export in tab-delimited (.tsv) or coma-separated (.csv) formats. Option --chains may be used to export results only for a specified chains.

The output name is actually a pattern that is used to export different metrics into separate files. For example exporting overlap metrics with the following command:

> mixcr exportTables pa/o.json.gz pa/o.tsv 

will produce the following files in the output:

> ls pa/* 

o.F1Index.TRAD.tsv
o.F1Index.TRB.tsv
o.F1Index.TRG.tsv
o.F2Index.TRAD.tsv
o.F2Index.TRB.tsv
o.F2Index.TRG.tsv
...